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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6470455 chr8:127678907 A/G PSMC1 chr14:90722839-90741773:+ -0.23 -5.98 4.29E-9 Box Plot
THCA rs647235 chr11:77566849 A/G INTS4L1 chr7:64601603-64694600:+ 0.43 7.73 6.2E-14 Box Plot
THCA rs6473213 chr8:51454089 A/G EMID2 chr7:101006122-101202304:+ -0.43 -6.38 4.1E-10 Box Plot
THCA rs6473214 chr8:51457804 T/A EMID2 chr7:101006122-101202304:+ -0.47 -6.54 1.59E-10 Box Plot
THCA rs647334 chr13:86313363 G/A TXN chr9:113006091-113018920:- -0.25 -6.04 3.06E-9 Box Plot
THCA rs6478413 chr9:100582024 A/G NKX6-1 chr4:85413140-85419603:- 0.43 6.97 1.05E-11 Box Plot
THCA rs6478469 chr9:100658938 A/G FAM81A chr15:59664892-59815748:+ -0.25 -6.01 3.68E-9 Box Plot
THCA rs6478471 chr9:100664382 A/G FAM81A chr15:59664892-59815748:+ -0.25 -5.94 5.63E-9 Box Plot
THCA rs6481013 chr10:51818250 C/T FAM21B chr10:47894023-47949412:+ 0.59 7.61 1.47E-13 Box Plot
THCA rs6481158 chr10:52023131 T/C FAM21B chr10:47894023-47949412:+ -0.38 -6.42 3.34E-10 Box Plot
THCA rs648158 chr17:18291857 T/C LOC162632 chr17:16614993-16707819:+ 0.47 8.14 3.35E-15 Box Plot
THCA rs6483800 chr11:21846130 A/C AKR7L chr1:19592476-19600688:- -0.32 -5.94 5.64E-9 Box Plot
THCA rs6484120 chr11:25221012 A/C ANKRD19 chr9:95571893-95650973:+ -0.33 -7.38 7.22E-13 Box Plot
THCA rs6484120 chr11:25221012 A/C C15orf21 chr15:45803334-45848928:+ -0.37 -6.72 5.13E-11 Box Plot
THCA rs6484120 chr11:25221012 A/C LOC606724 chr16:29460666-29461236:+ -0.18 -6.53 1.68E-10 Box Plot